What is Quarto?

Quarto is an open-source scientific and technical publishing system built on Pandoc.

Quarto evolved from RMarkdown in order to integrate other coding languages (e.g., Python, Julia, Observable, etc.).

Why should academics use Quarto?

It’s free! And it’s built with reproducibility in mind.

It makes collaboration and peer-reviewing a billion times easier!

Add text in-between code-chunks to explain your steps ( e.g., justifying your statistical assumptions).

Create presentation that make your teaching or presentations interactive.

Interactive Presentations

Quarto Revealjs Basics

---
title: "Basic Revealjs"
format: revealjs
editor: visual
---

## Quarto

Quarto enables you to weave together content and executable code into a finished presentation.

## Bullets

When you click the **Render** button a document will be generated that includes:

-   Content authored with markdown
-   Output from executable code

## Code

When you click the **Render** button a presentation will be generated that includes both content and the output of embedded code. You can embed code like this:

```{r}
1 + 1
```

:::

Interactive Data Vizualizations

{plotly}

library(plotly)
library(palmerpenguins)


plot_ly(penguins,
        x=~bill_length_mm,
        y=~bill_depth_mm,
        z=~body_mass_g,
        color = ~species)

Interactive Data Vizualizations

{ggiraph}

library(ggplot2)
library(ggiraph)
library(palmerpenguins)

interactplot <- ggplot(data = penguins,
                       aes(x = flipper_length_mm,
                           y = body_mass_g)) +
  geom_point_interactive(aes(color = species,
                             tooltip = species, 
                             data_id = species)) +
  theme_minimal()


girafe(ggobj = interactplot)

Quarto CVs

Git & GitHub

Git is a open-source version control system.

GitHub is cloud platform for hosting and sharing projects.

Clone GitHub Repo

Head here and then navigate to the green box that says “Code”.

Workshop Time!

1.) Open the workshop folder.

2.) Click on “quartobasics.qmd” and follow the directions.

3.) Click “reproworkflow.qmd” and follow along.